Table 3.
List of cycling genes in fly bodies (p < 0.01), as in Table 2
| Gene ID | Function | LD experiment | |
|---|---|---|---|
| p-β | Phase | ||
| Defense/immunity | |||
| LysX | Lysozyme X | 9.50E-03 | 17.55 |
| Lectin-galC1 | Galactose-specific C-type lectin | 3.60E-03 | 9.00 |
| CT8705 | PGRP-SC1b, peptidoglycan recognition protein | 1.87E-03 | 22.20 |
| Phas1 | Eukaryotic-initiation-factor-4E binding protein | 9.76E-03 | 23.00 |
| Ag5r | Antigen 5-related | 2.10E-03 | 21.31 |
| Chit | Chitinase-like | 6.84E-03 | 7.60 |
| CT5624 | Chitinase-like | 3.01E-03 | 17.25 |
| CT30310 | Drosomycin-like | 9.84E-03 | 15.12 |
| Idgf4 | Imaginal Disc Growth Factor 4, chitin binding protein | 2.20E-03 | 3.20 |
| CT29102 | Tep 4, complement-like protein | 3.51E-03 | 5.40 |
| Development | |||
| CT13185 | dorso-ventral patterning in oogenesis | 8.53E-03 | 4.90 |
| Detoxification | |||
| cyp9b2 | 4.91E-03 | 4.70 | |
| CT20826 | Cyp18a1 | 4.07E-03 | 19.34 |
| Cyp6gl | 1.86E-03 | 8.03 | |
| CT38747 | Glutathione transferase | 2.29E-03 | 5.90 |
| GstD1 | GlutathioneS-transferase B1 | 5.67E-03 | 7.30 |
| CT35150 | GlutathioneS-transferase-like | 4.46E-03 | 7.50 |
| CT35071 | UDP-glucuronosyltransferase | 9.59E-03 | 4.90 |
| Electron transfer | |||
| Cyt-A5 | Cytochrome A5-related | 7.50E-03 | 7.90 |
| Ligand binding/carrier | |||
| CT3751 | Triglyceride binding | 6.09E-03 | 6.50 |
| Mp20 | Muscle protein 2 | 8.59E-03 | 18.85 |
| Dbi | Diazepam-binding inhibitor | 7.95E-03 | 8.60 |
| PebIII | Ejaculatory bulb protein III | 4.14E-03 | 19.62 |
| CT33980 | Neural Lazarillo | 9.36E-03 | 19.72 |
| CT31326 | Antennal binding protein X-like | 6.24E-03 | 3.90 |
| CT32778 | Odorant binding protein | 2.78E-03 | 5.40 |
| CT21061 | Fatty acid binding protein-like | 1.94E-03 | 9.00 |
| Metabolism | |||
| CT16885 | Galactokinase | 1.46E-03 | 8.50 |
| wun | Phosphatidate phosphatase | 6.99E-03 | 19.01 |
| CT16187 | 3-Hydroxyisobutyryl-CoA hydrolase | 6.41E-03 | 0.50 |
| CT24308 | Threonine dehydratase | 6.48E-03 | 7.90 |
| CT6492 | Maltase L-like | 2.28E-03 | 6.80 |
| Hmgs | Hydroxymethylglutaryl-CoA synthase | 6.40E-03 | 23.06 |
| LvpH | Larval visceral protein H | 4.80E-03 | 7.50 |
| Pepck | Phosphoenolpyruvate carboxykinase | 6.50E-03 | 11.00 |
| Scu | 3-Hydroxyacyl-CoA dehydrogenase | 9.57E-03 | 8.90 |
| CT17038 | Malate dehydrogenase | 3.07E-03 | 8.10 |
| CT36683 | α-Amylase-like | 1.74E-03 | 8.40 |
| CT6532 | Maltase H-like | 4.49E-03 | 7.30 |
| CT22063 | Triacylglycerol lipase-like | 9.88E-03 | 7.60 |
| CT22069 | Hexokinase | 2.84E-03 | 8.00 |
| CT21171 | Carbonate dehydratase-like | 6.81E-03 | 4.70 |
| CT12913 | Ubiquinone biosynthesis | 6.51E-03 | 21.39 |
| CT34308 | UDP-glucose epimerase | 5.17E-03 | 8.50 |
| CT18319 | Pyrroline 5-carboxylate reductase-like | 6.39E-03 | 7.30 |
| CT33098 | α-glucosidase II | 3.93E-03 | 7.40 |
| CT19053 | Carbonate dehydratase-like | 5.82E-03 | 16.25 |
| CT41369 | 2.57E-03 | 4.70 | |
| CT28913 | Glucosylceramidase-like | 7.84E-03 | 9.45 |
| RfaBp | Retinoid- and fatty-acid binding protein | 2.28E-03 | 8.40 |
| RfaBp | Retinoid- and fatty-acid binding protein | 1.50E-03 | 9.60 |
| CT26924 | Glucose dehydrogenase-like | 6.49E-03 | 7.50 |
| α-Est5 | Carboxylesterase | 8.47E-03 | 10.00 |
| pug | Formate–tetrahydrofolate ligase | 8.23E-03 | 7.60 |
| α-Est7 | α-Esterase-7 | 9.35E-03 | 9.70 |
| ade5 | Phosphoribosylaminoimidazole carboxylase; EC:4.1.1.21 | 3.38E-03 | 9.50 |
| Pdh | Photoreceptor dehydrogenase | 9.23E-03 | 6.90 |
| CT30991 | IMP cyclohydrolase | 4.38E-03 | 9.80 |
| CT24026 | α-Galactosidase | 7.24E-03 | 8.90 |
| CT9666 | Transaldolase | 3.14E-03 | 8.50 |
| CT39259 | Oxidoreductase | 3.46E-03 | 3.10 |
| CT41283 | Cholinephosphate cytidylyltransferase | 6.56E-03 | 0.42 |
| CT33239 | N-acetyl transferase | 9.11E-03 | 15.44 |
| CT31087 | rRNA methyltransferase | 4.32E-03 | 13.20 |
| CT34977 | Epoxide hydrolase | 5.71E-03 | 6.30 |
| Muscle contraction | |||
| Mhc | Myosin II heavy chain | 6.81E-03 | 17.56 |
| TpnC73F | Troponin C at 73F | 6.66E-03 | 17.79 |
| Proteases | |||
| CT15463 | Zinc carboxypeptidase | 7.73E-03 | 21.92 |
| CT14806 | Vitellogenic carboxypeptidase | 7.54E-03 | 6.80 |
| CT14378 | Carboxypeptidase-like (inactive) | 3.89E-03 | 1.50 |
| CT4209 | Chymotrypsin | 3.30E-03 | 22.58 |
| CT37183 | Serine protease inhibitor | 1.66E-03 | 9.00 |
| CT25448 | Chymotrypsin | 8.12E-03 | 21.11 |
| CT8699 | Serine protease-like | 7.10E-03 | 22.52 |
| CT19724 | Serine protease | 6.97E-03 | 20.04 |
| CT37173 | Serine protease-like | 1.98E-03 | 14.30 |
| CT3996 | Cathepsin | 4.41E-03 | 9.30 |
| CT20780 | Cathepsin L | 5.44E-03 | 13.40 |
| Ser99Da | Serine protease 1 | 9.03E-03 | 23.59 |
| Ser99Db | Serine protease 2 | 9.91E-03 | 23.18 |
| CT29408 | Serine protease | 4.45E-03 | 22.77 |
| γ-Try | γ-Trypsin | 2.77E-03 | 20.66 |
| Protein synthesis/folding | |||
| CT25442 | Ribosomal protein K11-like | 7.71E-03 | 20.20 |
| CT17486 | Chaperone | 2.69E-03 | 19.57 |
| Signal transduction | |||
| pp1-13C | Ser/Thr phosphatase | 9.91E-03 | 5.80 |
| CkII-β | Casein kinase II β subunit | 7.15E-03 | 16.77 |
| cry | Cryptochrome | 5.77E-03 | 4.10 |
| Lk6 | Heat shock construct of Kidd | 4.74E-03 | 5.20 |
| CT22109 | Accessory gland peptide 36DE | 9.84E-03 | 17.93 |
| Stress response | |||
| Cat | Catalase | 1.53E-03 | 8.80 |
| CT33074 | Takeout | 4.71E-03 | 0.65 |
| CT9894 | Heat shock protein 70 | 6.26E-03 | 23.78 |
| Structural proteins | |||
| Gel | Gelsolin | 6.95E-03 | 7.80 |
| Msp-300 | Muscle-specific protein 3 | 8.02E-03 | 16.42 |
| CT33880 | Cuticle protein-like | 9.68E-03 | 17.33 |
| Glt | Glutactin | 4.72E-03 | 9.10 |
| CT41348 | A-band-protein-225 | 6.88E-03 | 17.09 |
| CT39472 | Peritrophin-15a | 4.86E-03 | 20.12 |
| Transcription | |||
| CT15944 | 7.39E-03 | 17.21 | |
| CT6009 | 9.47E-03 | 13.50 | |
| tim | Timeless | 3.98E-03 | 17.53 |
| Transporter | |||
| Vha13 | Hydrogen-transporting two-sector ATPase | 6.26E-03 | 21.66 |
| BY8473 | ATP-binding cassette transporter | 1.48E-03 | 22.77 |
| CT27832 | Sodium/phosphate cotransporter | 4.17E-03 | 17.16 |
| CT13124 | zetaCOP | 5.41E-03 | 20.56 |
| CT14766 | ATP-binding cassette transporter | 9.08E-03 | 18.53 |
| CT30783 | Sugar transporter-like | 6.99E-03 | 8.00 |
| CT10168 | Sodium/phosphate cotransporter | 6.97E-03 | 18.12 |
| CT19169 | Sugar transporter | 6.06E-03 | 6.70 |
| CT33284 | 4.70E-03 | 8.90 | |
| CT15971 | Amino-acid permease-like | 9.52E-03 | 17.98 |
| Unknown function | |||
| CT22723 | Senescence marker protein-3 | 3.39E-03 | 8.90 |
| Mst57Dc | Male-specific RNA 57Dc | 6.37E-03 | 16.93 |
| Gip | Gip-like | 8.12E-03 | 9.80 |
| CT26166 | Kisir | 4.69E-03 | 21.50 |
| CT19307 | 7.73E-03 | 20.48 | |
| CT21613 | 8.81E-03 | 17.97 | |
| CT35864 | 9.38E-03 | 14.41 | |
| CT14230 | 6.06E-03 | 6.50 | |
| CT14296 | 2.49E-03 | 6.60 | |
| CT23898 | 2.59E-03 | 9.30 | |
| CT23894 | 8.82E-04 | 7.50 | |
| CT21019 | 7.01E-03 | 5.70 | |
| CT9093 | 8.76E-03 | 18.52 | |
| CT35241 | 6.39E-03 | 9.30 | |
| CT25774 | 7.17E-03 | 8.00 | |
| CT27394 | 3.05E-03 | 9.00 | |
| CT35953 | 8.23E-03 | 3.00 | |
| CT34370 | 9.41E-03 | 17.70 | |
| CT22505 | 6.20E-03 | 7.60 | |
| CT12127 | 1.59E-03 | 7.70 | |
| CT35796 | 5.00E-03 | 17.12 | |
| CT26922 | 4.52E-03 | 8.90 | |
| CT33647 | 3.27E-03 | 0.00 | |
| CT27834 | 2.31E-03 | 7.80 | |
| CT18564 | 2.24E-03 | 23.50 | |
| CT35055 | 8.36E-03 | 7.50 | |
| CT35089 | 9.38E-03 | 5.00 | |
| CT8227 | 5.83E-03 | 20.29 | |
| CT18118 | 9.50E-03 | 20.02 | |
| CT42569 | 1.54E-03 | 22.14 | |
| CT40493 | 9.81E-03 | 9.00 | |
| CT33419 | 9.49E-03 | 1.95 | |
| CT34875 | 9.46E-03 | 15.36 | |
| CT32604 | 9.65E-03 | 19.09 | |
| CT39634 | 6.22E-03 | 8.40 | |
| CT22395 | 5.73E-03 | 21.98 | |
| CT33153 | 8.49E-03 | 5.20 | |
| CT12789 | 5.68E-03 | 21.28 | |
| CT1789 | 6.56E-03 | 2.80 | |
| CT40966 | 7.27E-03 | 6.00 | |
| CT36877 | 6.76E-03 | 23.39 | |
| CT26804 | 3.60E-03 | 21.31 | |
| CT26802 | 4.05E-03 | 21.61 | |
| CT28427 | 2.07E-03 | 5.40 | |
| CT38785 | 9.84E-03 | 2.50 | |
| CT34717 | 4.17E-03 | 5.70 | |
| CT18134 | 3.68E-03 | 9.90 | |
| CT33073 | 5.64E-03 | 13.90 | |
| CT37044 | 4.08E-03 | 3.30 | |
| CT33083 | 8.21E-03 | 9.30 | |
| CT29612 | 9.10E-03 | 20.14 | |
| CT20261 | 4.25E-03 | 7.80 | |
| CT34939 | 1.41E-03 | 9.40 | |
| CT34936 | 8.21E-03 | 11.00 | |
| CT37419 | 8.18E-03 | 13.90 | |
| CT36793 | 3.98E-03 | 16.56 | |
| CT18390 | 3.53E-03 | 1.30 | |
| CT9987 | 9.65E-03 | 7.70 | |
| CT29500 | 4.76E-03 | 21.63 | |
| CT35842 | 6.17E-03 | 8.60 | |
| CT32316 | 7.80E-03 | 3.40 | |
| CT16297 | 9.32E-03 | 17.56 | |
| CT21565 | 9.20E-03 | 18.83 | |
| CT42272 | 5.07E-03 | 6.20 | |