TABLE 1 .
Interclass correlation coefficients calculated for respiratory and intestinal tracts
Sample type | Genus | Proportion of total no. of reads (%) |
ICCa |
---|---|---|---|
Respiratory | Bacteroides | 18 | 0.54 |
Bifidobacterium | 12 | 0.61 | |
Veillonella | 10 | 0.29 | |
Clostridium | 9 | <0.01 | |
Blautia | 9 | 0.36 | |
Parabacteroides | 8 | 0.60 | |
Intestinal | Streptococcus | 38 | <0.01 |
Veillonella | 10 | 0.23 | |
Prevotella | 9 | 0.05 | |
Bacteroides | 5 | <0.01 | |
Neisseria | 3 | 0.30 | |
Haemophilus | 3 | <0.01 |
ICC, intraclass correlation coefficient. The values of ICC are bounded between 0 and 1, with values approaching 1 signifying that a greater proportion of the total variation in microbial normalized abundance is accounted for by between-subject variation (intersubject variation). The ICC can also be interpreted as the proportion of total variance in microbial normalized abundance that is “between subjects.”